Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883957.1_cds_XP_016438666.1_34307
CDS Infomation

[gene=LOC107764585] [db_xref=GeneID:107764585] [protein=transcription factor bHLH62-like] [protein_id=XP_016438666.1] [location=join(267..995,1301..1492,1789..1854,1948..2016,2124..2195,2481..2693,2912..2990,3346..3383)] [gbkey=CDS]
Sequence

ATGGAGAAGGGAAATTTATTTACAAATGATGGTAACACTACAATAGGCAATTATGGACTT
GAAATTCAAGAAAATGAGCAAATTCAAAATTGTTTTTTTAATCCAAATTGGGAAAATTCT
GATCCATTTGAGTCTGCATTAAGTTCTATGGTATCATCTCCAAATGCCAATATTCCAAAT
AATAGTAGTGGTGATAATTTTGTACTAAGGGAATTAATTGGTAGATTAGGTAGTATTTGT
AATTCAAGAGAAATGTCACCAAATTCCAATATGATTAATAGTAGTACTAACAATTCTTGT
TATACTACTCCATTAAATTCTCCACCAAAATTAAATCTTTCTATGATGGGCAATTTGTCA
CATAATCAATTGCCACAATTTAGTGCTGATCCTGGATTTGCTGAAAGAGCAGCAAAATTT
TCTTGTTTTGCTAATAAAACTTTCAAAAGTTTTAATGAAGCTGAATTGTTGCAACACAAT
AGACAAATTGTAGCACAGCCAAATTTGGAAAGTGGGAAACTTTCAAGAGTTTCAAGTAAT
CAGTCTATTAAAGTCTCATCTGGATCTCAAATTCAAGAATTCAAAGATGTGAATTTAGCT
ACAAAAAATTCAGAATTTGGTGATTCAAGGGAAAATTCTTCAGTTTCTGAGCAGATTCCA
GTTGGTGAAAATGATACCAATTCAAGAAAAAGGAAATCAATTTCCAAGGGAAAATCCAAG
AATGCTAATGTTTCATTAGAGAAAAATGAATCAAATGCTAAAAGAAGTAAGTCTGAGGAG
AATAATGGAAATGATAAAGCAAAAGAAGAGGAAAAAGCTGCTAAAAAAGAAGAAAAAGCT
GTTCCAGAGCCACCAAAGGATTATATTCATGTGAGAGCTAGAAGGGGACAGGCCACAGAT
GCACATAGTCTAGCTGAAAGAGTGAGAAGAGAGAAAATAAGTGAAAGAATGAAGCTTCTA
CAAGATCTTGTACCAGGCTGCAATAAGGTGACTGGAAAAGCAGTGATGCTGGATGAGATT
ATTAACTATGTACAATCACTTCAACGCCAAGTTGAGTTCCTTTCAATGAAGTTAGCTACT
GTAAATCCTAGAATGGACTTTAATATGGAAGCTCTTCTTTCCAAGGATATGTTTCAATCT
AGAGGATCATTGGCACAAAACATGTATTCATCAGAAACTTCAGCACAAGCATTTCCTTAT
GGATTTCAATCTCAGCCAGGACAAAACTTTCATAAAGGAACAGAGTTTCCATTTCCAATA
AACTCCTTGAATAATAATTTGGCTAGAAATTCAAATATGCAATTGCCTTCTCTAGATGGT
TATGTTGAATCTACCCCTCAGGTCCCCCCATTCTTTGAGGATGATCTCAATAGTGTTGTT
CAAATGGGCTTTGGCCAAAATCAGAACCAGAGTTATCCTGGTAATATTCCTACTTCACAA
ATGAAAGTTGAGCTATGA

Peptide Sequence

PEP ID

XP_016438666.1
PEP Infomation

PREDICTED: transcription factor bHLH62-like [Nicotiana tabacum]
Sequence

MEKGNLFTNDGNTTIGNYGLEIQENEQIQNCFFNPNWENSDPFESALSSMVSSPNANIPN
NSSGDNFVLRELIGRLGSICNSREMSPNSNMINSSTNNSCYTTPLNSPPKLNLSMMGNLS
HNQLPQFSADPGFAERAAKFSCFANKTFKSFNEAELLQHNRQIVAQPNLESGKLSRVSSN
QSIKVSSGSQIQEFKDVNLATKNSEFGDSRENSSVSEQIPVGENDTNSRKRKSISKGKSK
NANVSLEKNESNAKRSKSEENNGNDKAKEEEKAAKKEEKAVPEPPKDYIHVRARRGQATD
AHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT
VNPRMDFNMEALLSKDMFQSRGSLAQNMYSSETSAQAFPYGFQSQPGQNFHKGTEFPFPI
NSLNNNLARNSNMQLPSLDGYVESTPQVPPFFEDDLNSVVQMGFGQNQNQSYPGNIPTSQ
MKVEL

Transcript Sequence

Gene sequence data has not been registered.